Module 3.2 ¨C Getting started with MicrobeTrace

What to know

This module introduces MicrobeTrace, an interactive tool for transmission network analysis using SARS-CoV-2 sequencing and contact tracing data.

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Overview

Presenter: Ellsworth Campbell, MS | Computational Biologist, ÐÇ¿ÕÓéÀÖ¹ÙÍø
Download Presentation Slides [PDF - 31 slides]

Updated 9-13-21 – New slides 22 and 23 include additional information on MicrobeTrace settings for Nextstrain trees.

Further Reading

  1. ÐÇ¿ÕÓéÀÖ¹ÙÍø, 2021.

Additional Resources

  1. ÐÇ¿ÕÓéÀÖ¹ÙÍø, updated 2020.
  2. Campbell, et al. bioRxiv, 2020.
  3. Participation in fraternity and sorority activities and the spread of COVID-19 among residential university communities — Arkansas, August 21–September 5, 2020. Vang, et al. MMWR, 2021.
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Content Source:
National Center for Emerging and Zoonotic Infectious Diseases (NCEZID)